C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 0610030E20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077783 0610030E20Rik-201 ENSMUSG00000058706 10090 + 6:72347317-72353158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077783
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077783 3.567±0.23 7.467±1.02 11.169±2.22 2.382±2.07 4.615±2.41 6.426±0.84 1.597±0.49 5.356±1.04 7.721±2.36 3.462±0.00 0.722±0.21 7.496±3.72 4.234±1.96 4.612±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0003NX CIL_0003NX_0002 CGP 6:72318678-72353158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306336 C2orf68-001 protein_coding Homo_sapiens 0 529
ENST00000409734 C2orf68-002 protein_coding Homo_sapiens 0 279
ENST00000420686 C2orf68-004 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000423181 C2orf68-003 nonsense_mediated_decay Homo_sapiens 0.000000000004 77

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