C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator of cell motility 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078459 Memo1-201 ENSMUSG00000058704 10090 - 17:74200706-74294883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078459 10.164±3.62 45.622±11.35 17.787±4.40 19.494±9.11 12.952±4.81 17.350±4.74 7.207±0.74 6.968±1.69 22.001±12.79 8.878±1.38 13.757±2.46 16.715±4.58 16.857±1.89 23.976±11.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JI CIL_0003JI_0003 CGP 17:74017706-74294883
CIL_0000VB CIL_0000VB_0002 CGP 17:74200706-74323944

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IEA cytosol
GO:0032886 ISS regulation of microtubule-based process
GO:0042277 ISO peptide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295065 MEMO1-001 protein_coding Homo_sapiens 0 1914
ENST00000379383 MEMO1-005 protein_coding Homo_sapiens 0 1637
ENST00000404530 MEMO1-003 protein_coding Homo_sapiens 0 1762
ENST00000407893 MEMO1-009 protein_coding Homo_sapiens 0 486
ENST00000413686 MEMO1-010 processed_transcript Homo_sapiens 0 857
ENST00000422936 MEMO1-008 processed_transcript Homo_sapiens 0 255
ENST00000426310 MEMO1-011 protein_coding Homo_sapiens 0 1430
ENST00000437854 MEMO1-007 protein_coding Homo_sapiens 9e-29 130
ENST00000441868 RP3-352A20.1-001 processed_pseudogene Homo_sapiens 0 1262
ENST00000446765 DPY30-005 processed_transcript Homo_sapiens 0 1637
ENST00000452572 MEMO1P1-001 processed_pseudogene Homo_sapiens 0 1391
ENST00000459811 MEMO1P3-001 processed_pseudogene Homo_sapiens 0 422
ENST00000490459 MEMO1-002 processed_transcript Homo_sapiens 0 664

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