C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sp7 transcription factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078508 Sp7-201 ENSMUSG00000060284 10090 - 15:102356609-102366325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078508 0.240±0.09 0.274±0.04 0.098±0.03 0.227±0.14 0.112±0.05 0.099±0.06 0.014±0.01 0.031±0.01 0.035±0.02 0.016±0.01 0.019±0.00 0.731±0.36 0.095±0.06 0.064±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060N CIL_00060N_0002 CGP 15:102338247-102366325
CIL_00060O CIL_00060O_0002 CGP 15:102356609-102436404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IMP osteoblast differentiation
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0017151 IPI DEAD/H-box RNA helicase binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0060218 IEA hematopoietic stem cell differentiation
GO:2000738 IEA positive regulation of stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303846 SP7-002 protein_coding Homo_sapiens 0 1687
ENST00000536324 SP7-001 protein_coding Homo_sapiens 0 1683
ENST00000537210 SP7-003 protein_coding Homo_sapiens 0 1557
ENST00000547755 SP7-005 protein_coding Homo_sapiens 0 1011

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