C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sp7 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536324 SP7-001 ENSG00000170374 9606 - 12:53326575-53336382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000536324
Transcript ID Brain Testis
ENST00000536324 0.542±0.00 1.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060N CIL_00060N_0001 CGP 12:53307456-53345315
CIL_00060O CIL_00060O_0001 CGP 12:53326575-53416446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 ISS osteoblast differentiation
GO:0003677 ISS DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0017151 ISS DEAD/H-box RNA helicase binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0060218 IDA hematopoietic stem cell differentiation
GO:2000738 IDA positive regulation of stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078508 Sp7-201 protein_coding Mus_musculus 0 1683

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