C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crystallin, beta A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078623 Cryba1-001 ENSMUSG00000000724 10090 - 11:77718627-77725283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryENSMUST00000078623
Transcript ID Bladder Brain Breast Liver Ovary
ENSMUST00000078623 0.013±0.00 0.038±0.00 0.133±0.03 0.026±0.02 0.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002088 IEA lens development in camera-type eye
GO:0005212 TAS structural constituent of eye lens
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007601 IEA visual perception
GO:0042803 IPI protein homodimerization activity
GO:0043010 IMP camera-type eye development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225387 CRYBA1-001 protein_coding Homo_sapiens 0 944
ENST00000484605 CRYBA1-002 nonsense_mediated_decay Homo_sapiens 0 268

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