C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10 (sodium/bile acid cotransporter family), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078748 Slc10a5-201 ENSMUSG00000058921 10090 - 3:10331734-10335656 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078748 0.026±0.01 0.036±0.00 0.716±0.16 0.040±0.02 0.374±0.18 8.649±1.16 0.047±0.05 9.057±0.77 10.607±8.46 1.425±0.26 0.007±0.00 0.050±0.02 0.555±0.63 0.163±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G1 CIL_0003G1_0002 CGP 3:10313540-10335656
CIL_0003NB CIL_0003NB_0002 CGP 3:10331734-10351317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006814 IEA sodium ion transport
GO:0008150 ND biological_process
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000518568 SLC10A5-001 protein_coding Homo_sapiens 0 782

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