C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518568 SLC10A5-001 ENSG00000253598 9606 - 8:81693607-81696174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000518568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000518568 0.032±0.00 0.246±0.00 1.766±0.00 0.274±0.08 0.050±0.01 0.616±0.55 0.066±0.03 1.748±1.51 0.238±0.01 0.289±0.28 0.079±0.00 0.368±0.25 0.036±0.02 0.056±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G1 CIL_0003G1_0001 CGP 8:81657961-81696174
CIL_0003NB CIL_0003NB_0001 CGP 8:81693607-81732903

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078748 Slc10a5-201 protein_coding Mus_musculus 0 782

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