C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078953 Dennd6b-201 ENSMUSG00000015377 10090 - 15:89182217-89196474 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078953 2.588±0.21 2.824±0.45 4.548±0.76 21.261±10.54 2.849±1.06 2.888±0.83 2.712±0.29 1.792±0.56 1.363±0.37 2.552±0.73 2.424±0.60 3.607±0.36 1.050±0.44 10.703±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V2 CIL_0000V2_0003 CGP 15:89182217-89286261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005768 IEA endosome
GO:0017112 ISS Rab guanyl-nucleotide exchange factor activity
GO:0032851 ISS positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000413817 DENND6B-001 protein_coding Homo_sapiens 0 1914
ENST00000433760 DENND6B-004 protein_coding Homo_sapiens 0 396
ENST00000460087 DENND6B-003 retained_intron Homo_sapiens 0 248
ENST00000471942 DENND6B-005 retained_intron Homo_sapiens 0 728
ENST00000495607 DENND6B-002 retained_intron Homo_sapiens 0 760

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