C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079158 Abcc5-001 ENSMUSG00000022822 10090 - 16:20331303-20426394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079158 5.611±1.31 3.680±0.20 5.907±0.22 7.924±1.75 3.446±0.16 1.353±0.59 3.711±0.91 2.005±0.89 4.874±0.15 4.787±1.23 5.150±1.67 7.766±3.99 1.450±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265586 ABCC5-201 protein_coding Homo_sapiens 0 3866
ENST00000334444 ABCC5-001 protein_coding Homo_sapiens 0 6228
ENST00000382494 ABCC5-005 protein_coding Homo_sapiens 0 640
ENST00000392579 ABCC5-004 protein_coding Homo_sapiens 0 643
ENST00000427120 ABCC5-006 protein_coding Homo_sapiens 0 641
ENST00000437205 ABCC5-007 nonsense_mediated_decay Homo_sapiens 0 4492
ENST00000438979 ABCC5-009 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000443376 ABCC5-003 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000443497 ABCC5-013 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000476402 ABCC5-012 retained_intron Homo_sapiens 0 459
ENST00000492216 ABCC5-011 processed_transcript Homo_sapiens 0 1024

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