C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1190007I07 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079648 1190007I07Rik-001 ENSMUSG00000063320 10090 - 10:82619851-82623196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079648
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079648 8.396±0.71 27.133±5.90 5.570±1.79 7.360±1.05 15.224±3.56 17.252±3.32 8.133±4.17 11.898±4.20 11.751±1.65 7.802±3.45 11.492±1.53 17.356±4.43 3.811±1.81 3.443±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000002 CIL_000002_0003 CGP 10:82619851-82650799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378090 C12orf73-001 protein_coding Homo_sapiens 0 254
ENST00000543740 C12orf73-004 processed_transcript Homo_sapiens 4e-39 167
ENST00000547945 C12orf73-009 protein_coding Homo_sapiens 0 255
ENST00000547975 C12orf73-003 protein_coding Homo_sapiens 3e-39 167
ENST00000549478 C12orf73-002 protein_coding Homo_sapiens 0 255
ENST00000549960 C12orf73-010 nonsense_mediated_decay Homo_sapiens 1e-39 167
ENST00000552460 C12orf73-011 nonsense_mediated_decay Homo_sapiens 7e-37 158
ENST00000553183 C12orf73-005 protein_coding Homo_sapiens 0 255

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