C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000002_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045797-ENSDARG00000086450 CGP 7955 25:19441626-19454263
GeneTranscriptPositionBiotype
ENSDARG00000045797 (C25H12orf73)
chromosome 12 open reading frame 73 		ENSDART00000067320 (C25H12orf73-201) 19441862-19442321 protein_coding
ENSDART00000155927 (C25H12orf73-001) 19441626-19443394 protein_coding
ENSDARG00000086450 (TDG (2 of 2))
thymine-DNA glycosylase 		ENSDART00000123207 (TDG (2 of 2)-201) 19444277-19454260 protein_coding
ENSDART00000154291 (TDG (2 of 2)-002) 19443828-19447724 protein_coding
ENSDART00000155610 (TDG (2 of 2)-001) 19443647-19454263 protein_coding
CIL_000002_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204954-ENSG00000139372 CGP 9606 12:103950202-103988874
GeneTranscriptPositionBiotype
ENSG00000166598 (HSP90B1)
heat shock protein 90kDa beta (Grp94), member 1 		ENST00000299767 (HSP90B1-001) 103930334-103947926 protein_coding
ENST00000540297 (HSP90B1-008) 103930410-103933990 nonsense_mediated_decay
ENST00000548462 (HSP90B1-003) 103930438-103947927 retained_intron
ENST00000548622 (HSP90B1-007) 103930382-103932176 retained_intron
ENST00000549334 (HSP90B1-006) 103930107-103932929 protein_coding
ENST00000550479 (HSP90B1-009) 103938238-103941768 retained_intron
ENST00000550595 (HSP90B1-012) 103943796-103953645 protein_coding
ENST00000551983 (HSP90B1-010) 103941834-103943467 retained_intron
ENST00000552051 (HSP90B1-011) 103943619-103947400 retained_intron
ENST00000614327 (HSP90B1-201) 103930438-103947901 protein_coding
ENSG00000215976 (AC078819.1)
 ENST00000401157 (AC078819.1-201) 103985111-103985204 miRNA
CIL_000002_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063320-ENSMUSG00000034674 CGP 10090 10:82619851-82650799
GeneTranscriptPositionBiotype
ENSMUSG00000020251 (Glt8d2)
glycosyltransferase 8 domain containing 2 		ENSMUST00000020485 (Glt8d2-001) 82650433-82690650 protein_coding
ENSMUST00000065815 (Glt8d2-003) 82652543-82690617 protein_coding
ENSMUST00000125505 (Glt8d2-004) 82654772-82690617 nonsense_mediated_decay
ENSMUST00000128142 (Glt8d2-007) 82651308-82653199 retained_intron
ENSMUST00000140071 (Glt8d2-002) 82669279-82690629 retained_intron
ENSMUST00000150269 (Glt8d2-006) 82651561-82652980 protein_coding
ENSMUST00000155529 (Glt8d2-005) 82664637-82670468 protein_coding
ENSMUSG00000034674 (Tdg)
thymine DNA glycosylase 		ENSMUST00000092266 (Tdg-001) 82629828-82650324 protein_coding
ENSMUST00000125970 (Tdg-007) 82644438-82647601 retained_intron
ENSMUST00000133227 (Tdg-003) 82629876-82641322 processed_transcript
ENSMUST00000135652 (Tdg-006) 82644024-82644661 retained_intron
ENSMUST00000142658 (Tdg-008) 82646905-82648236 retained_intron
ENSMUST00000145370 (Tdg-004) 82630667-82644289 protein_coding
ENSMUST00000148790 (Tdg-005) 82641162-82644305 retained_intron
ENSMUST00000151390 (Tdg-002) 82629859-82650799 protein_coding
ENSMUST00000176195 (Tdg-010) 82641440-82648879 nonsense_mediated_decay
ENSMUST00000176326 (Tdg-009) 82644478-82649102 protein_coding
ENSMUST00000177353 (Tdg-011) 82641441-82648686 protein_coding
ENSMUSG00000063320 (1190007I07Rik)
RIKEN cDNA 1190007I07 gene 		ENSMUST00000079648 (1190007I07Rik-001) 82619851-82623196 protein_coding
ENSMUST00000176200 (1190007I07Rik-002) 82619851-82622926 protein_coding
ENSMUST00000183363 (1190007I07Rik-004) 82620026-82623190 protein_coding
ENSMUST00000183416 (1190007I07Rik-003) 82622361-82623137 protein_coding
ENSMUST00000185168 (1190007I07Rik-005) 82619942-82623228 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000002_0001ENSDARG00000045797ENSDART00000067320ENSDART00000155927ENSDARG00000086450ENSDART00000123207ENSDART00000154291ENSDART00000155610CIL_000002_0002ENSG00000166598ENST00000299767ENST00000540297ENST00000548462ENST00000548622ENST00000549334ENST00000550479ENST00000550595ENST00000551983ENST00000552051ENST00000614327ENSG00000215976ENST00000401157CIL_000002_0003ENSMUSG00000020251ENSMUST00000020485ENSMUST00000065815ENSMUST00000125505ENSMUST00000128142ENSMUST00000140071ENSMUST00000150269ENSMUST00000155529ENSMUSG00000034674ENSMUST00000092266ENSMUST00000125970ENSMUST00000133227ENSMUST00000135652ENSMUST00000142658ENSMUST00000145370ENSMUST00000148790ENSMUST00000151390ENSMUST00000176195ENSMUST00000176326ENSMUST00000177353ENSMUSG00000063320ENSMUST00000079648ENSMUST00000176200ENSMUST00000183363ENSMUST00000183416ENSMUST00000185168
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000002_0001ENSDARG00000045797ENSDART00000067320ENSDART00000155927ENSDARG00000086450ENSDART00000123207ENSDART00000154291ENSDART00000155610CIL_000002_0002ENSG00000166598ENST00000299767ENST00000550595ENST00000552051ENST00000614327ENSG00000215976ENST00000401157CIL_000002_0003ENSMUSG00000020251ENSMUST00000020485ENSMUST00000065815ENSMUST00000155529ENSMUSG00000034674ENSMUST00000092266ENSMUST00000133227ENSMUST00000142658ENSMUST00000151390ENSMUST00000176195ENSMUST00000176326ENSMUSG00000063320ENSMUST00000079648ENSMUST00000176200ENSMUST00000183363ENSMUST00000183416ENSMUST00000185168
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045797 ENSDART00000067320 N/A N/A N/A 10.688±0.00 N/A N/A 28.791±0.00 N/A 2.725±0.00 N/A 8.399±0.00 N/A N/A N/A
ENSDART00000155927 N/A N/A N/A 5.976±3.66 N/A N/A 6.547±6.09 1.190±1.16 0.306±0.00 N/A 5.847±0.00 N/A N/A N/A
ENSDARG00000086450 ENSDART00000123207 N/A N/A N/A 2.534±0.24 N/A N/A 1.036±0.45 0.738±0.11 0.123±0.00 N/A 0.359±0.00 N/A N/A N/A
ENSDART00000154291 N/A N/A N/A 1.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155610 N/A N/A N/A 0.657±0.03 N/A N/A N/A 0.777±0.39 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166598 ENST00000299767 101.231±0.00 235.799±0.00 27.746±0.00 47.462±23.97 101.720±8.43 140.349±102.97 41.646±27.21 160.085±54.41 197.688±162.48 126.130±70.19 15.099±11.41 167.733±61.81 298.515±83.16 141.003±1.25
ENST00000540297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 205.678±0.00 86.694±0.00
ENST00000551983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552051 N/A N/A N/A 37.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 589.618±0.00 339.420±0.00
ENST00000614327 N/A N/A 22.209±0.00 N/A N/A N/A N/A N/A 15.773±0.00 N/A N/A N/A N/A N/A
ENSG00000215976 ENST00000401157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.939±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020251 ENSMUST00000020485 2.069±0.19 N/A 10.408±0.18 2.798±0.00 2.905±0.49 N/A 0.907±0.12 N/A N/A 2.616±0.37 0.833±0.00 N/A N/A 2.365±0.00
ENSMUST00000065815 N/A N/A N/A 12.906±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.385±0.00
ENSMUST00000125505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.836±0.00
ENSMUSG00000034674 ENSMUST00000092266 2.558±0.65 N/A 9.268±0.80 20.136±12.05 4.022±1.06 2.876±1.18 2.399±0.42 2.849±0.79 6.097±5.12 3.112±0.66 4.267±0.96 4.742±2.45 11.327±3.76 1.404±0.55
ENSMUST00000125970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.814±0.82 N/A N/A
ENSMUST00000135652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.288±0.00 N/A N/A
ENSMUST00000145370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151390 4.826±1.68 9.389±3.44 2.939±0.41 12.098±1.75 3.834±1.47 5.964±2.65 0.733±0.17 2.189±0.62 3.316±0.58 4.881±0.95 0.721±0.20 7.972±1.94 4.161±1.53 0.980±0.08
ENSMUST00000176195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.227±0.00 N/A
ENSMUST00000176326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.628±0.47 10.839±1.41 21.694±8.80 N/A
ENSMUST00000177353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063320 ENSMUST00000079648 8.396±0.71 27.133±5.90 5.570±1.79 7.360±1.05 15.224±3.56 17.252±3.32 8.133±4.17 11.898±4.20 11.751±1.65 7.802±3.45 11.492±1.53 17.356±4.43 3.811±1.81 3.443±0.37
ENSMUST00000176200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.235±0.00 N/A 1.511±0.00 2.189±0.89
ENSMUST00000183363 7.035±1.48 10.231±0.00 N/A 73.916±0.00 9.655±1.03 5.586±0.85 7.496±2.33 8.932±0.98 8.145±3.84 N/A 12.541±1.40 58.412±0.00 27.428±30.02 19.152±17.23
ENSMUST00000183416 6.222±2.34 8.986±2.39 N/A N/A 7.203±0.85 5.601±0.59 4.200±0.27 5.528±1.30 5.322±1.63 4.846±1.38 N/A 8.194±1.64 2.341±0.00 2.327±0.42
ENSMUST00000185168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.905±0.00 N/A

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