C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079833 Hsf2-201 ENSMUSG00000019878 10090 + 10:57486385-57513133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079833 3.912±2.05 3.828±0.73 3.121±0.06 10.887±3.26 2.433±1.00 1.785±0.46 2.232±0.19 2.448±0.49 3.817±1.44 2.686±0.71 2.941±0.60 5.465±2.02 4.827±1.75 5.443±2.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OP CIL_0005OP_0002 CGP 10:57486385-57532530

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001162 IEA RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006950 IEA response to stress
GO:0007283 IMP spermatogenesis
GO:0042803 IDA protein homodimerization activity
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368455 HSF2-002 protein_coding Homo_sapiens 0 1653
ENST00000452194 HSF2-201 protein_coding Homo_sapiens 0 2368
ENST00000465214 HSF2-001 protein_coding Homo_sapiens 0 750
ENST00000553115 RP11-616L12.4-001 processed_pseudogene Homo_sapiens 0 985

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