C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RUN and FYVE domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080167 Rufy4-001 ENSMUSG00000061815 10090 + 1:74125541-74148223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080167
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080167 0.642±0.52 0.340±0.13 0.171±0.00 0.360±0.15 0.095±0.04 0.263±0.00 0.960±0.40 0.098±0.06 0.514±0.25 0.031±0.01 0.523±0.23 4.892±3.47 0.127±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005MB CIL_0005MB_0002 CGP 1:73910231-74148223
CIL_0005VO CIL_0005VO_0002 CGP 1:74125541-74161246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344321 RUFY4-201 protein_coding Homo_sapiens 0 490
ENST00000374155 RUFY4-002 protein_coding Homo_sapiens 0 490
ENST00000457754 RUFY4-001 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000495721 RUFY4-008 retained_intron Homo_sapiens 0 219

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