C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080415 Cabyr-002 ENSMUSG00000024430 10090 + 18:12741347-12755140 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungMuscleOvaryPlacentaENSMUST00000080415
Transcript ID Adipose Adrenal Brain Breast Liver Lung Muscle Ovary Placenta
ENSMUST00000080415 0.094±0.05 0.021±0.00 1.682±0.00 0.055±0.03 0.107±0.00 0.018±0.00 0.042±0.02 0.175±0.08 0.115±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WT CIL_0005WT_0002 CGP 18:12599926-12755146
CIL_0005WS CIL_0005WS_0002 CGP 18:12741324-12941841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0019722 NAS calcium-mediated signaling
GO:0019899 ISS enzyme binding
GO:0019904 IPI protein domain specific binding
GO:0031514 ISS motile cilium
GO:0035686 IDA sperm fibrous sheath
GO:0046982 IDA protein heterodimerization activity
GO:0048240 NAS sperm capacitation
GO:0051259 NAS protein oligomerization
GO:0097228 IDA sperm principal piece
GO:0097229 IDA sperm end piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327201 CABYR-004 protein_coding Homo_sapiens 0 706
ENST00000399481 CABYR-201 protein_coding Homo_sapiens 0 802
ENST00000399496 CABYR-001 protein_coding Homo_sapiens 0 706
ENST00000399499 CABYR-202 protein_coding Homo_sapiens 0 706
ENST00000415309 CABYR-005 protein_coding Homo_sapiens 0 453
ENST00000463087 CABYR-002 nonsense_mediated_decay Homo_sapiens 0 802
ENST00000465493 CABYRP1-001 processed_pseudogene Homo_sapiens 0 560
ENST00000486759 CABYR-003 nonsense_mediated_decay Homo_sapiens 0 802
ENST00000579102 CABYR-008 protein_coding Homo_sapiens 0 283
ENST00000579956 CABYR-013 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000581397 CABYR-006 protein_coding Homo_sapiens 0 695
ENST00000581872 CABYR-011 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000584752 CABYR-012 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000621648 CABYR-203 protein_coding Homo_sapiens 0 802

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