C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deformed epidermal autoregulatory factor 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080553 Deaf1-201 ENSMUSG00000058886 10090 - 7:141297176-141327725 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080553 11.068±2.42 10.107±2.49 5.999±0.86 17.622±6.29 6.946±3.10 8.995±2.23 2.345±1.07 5.362±2.20 2.945±1.68 7.241±2.35 3.459±0.91 10.772±3.34 9.168±6.33 3.232±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OP CIL_0003OP_0002 CGP 7:141292006-141327725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IMP behavioral fear response
GO:0001843 IMP neural tube closure
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0008542 IMP visual learning
GO:0033599 IMP regulation of mammary gland epithelial cell proliferation
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048706 IMP embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382409 DEAF1-001 protein_coding Homo_sapiens 0 1908
ENST00000529717 DEAF1-003 nonsense_mediated_decay Homo_sapiens 0 196

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