C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4559
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080669 Gm4559-201 ENSMUSG00000056885 10090 - 7:142273764-142274363 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000080669
Transcript ID Brain Ovary Testis
ENSMUST00000080669 0.013±0.00 0.371±0.09 0.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398531 KRTAP5-10-001 protein_coding Homo_sapiens 2e-36 158
ENST00000398534 KRTAP5-8-001 protein_coding Homo_sapiens 6e-31 139
ENST00000399676 KRTAP5-5-001 protein_coding Homo_sapiens 3e-32 143
ENST00000399685 KRTAP5-3-001 protein_coding Homo_sapiens 1e-21 108
ENST00000412090 KRTAP5-2-001 protein_coding Homo_sapiens 5e-39 165
ENST00000502328 KRTAP5-14P-001 processed_pseudogene Homo_sapiens 2e-25 117
ENST00000511464 AP000867.14-001 processed_pseudogene Homo_sapiens 1e-36 156
ENST00000528743 KRTAP5-9-001 protein_coding Homo_sapiens 0 226
ENST00000610555 KRTAP5-8-201 protein_coding Homo_sapiens 0 226
ENST00000612541 KRTAP5-2-201 protein_coding Homo_sapiens 5e-39 165
ENST00000613035 AC130310.2-201 protein_coding Homo_sapiens 9e-31 137
ENST00000615268 AC130310.3-202 protein_coding Homo_sapiens 6e-23 111
ENST00000616336 AC130310.3-201 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000617152 KRTAP5-11-202 protein_coding Homo_sapiens 0 213
ENST00000618541 KRTAP5-5-201 protein_coding Homo_sapiens 4e-32 143
ENST00000619191 KRTAP5-10-202 protein_coding Homo_sapiens 0 198
ENST00000620564 KRTAP5-3-201 protein_coding Homo_sapiens 1e-21 108

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