C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin associated protein), delta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081728 Ctnnd2-201 ENSMUSG00000022240 10090 + 15:30172593-31029311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081728 0.212±0.19 0.823±0.14 3.613±0.02 24.010±18.78 0.216±0.19 0.366±0.08 0.047±0.01 0.102±0.02 0.040±0.04 1.426±0.49 0.009±0.00 0.226±0.09 0.332±0.33 0.467±0.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001763 IDA morphogenesis of a branching structure
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007612 IMP learning
GO:0014069 IEA postsynaptic density
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030054 IEA cell junction
GO:0043005 IEA neuron projection
GO:0048167 IMP regulation of synaptic plasticity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304623 CTNND2-001 protein_coding Homo_sapiens 0 3941
ENST00000458100 CTNND2-201 protein_coding Homo_sapiens 0 1821
ENST00000495388 CTNND2-007 processed_transcript Homo_sapiens 0 2318
ENST00000502551 CTNND2-009 protein_coding Homo_sapiens 0 497
ENST00000503622 CTNND2-004 protein_coding Homo_sapiens 0 2071
ENST00000504354 CTNND2-011 processed_transcript Homo_sapiens 0 588
ENST00000504499 CTNND2-003 nonsense_mediated_decay Homo_sapiens 0 2076
ENST00000506735 CTNND2-016 processed_transcript Homo_sapiens 0 725
ENST00000507430 CTNND2-015 retained_intron Homo_sapiens 0 765
ENST00000508761 CTNND2-008 protein_coding Homo_sapiens 0 676
ENST00000509868 CTNND2-013 processed_transcript Homo_sapiens 0 542
ENST00000511278 CTNND2-010 processed_transcript Homo_sapiens 0 499
ENST00000511377 CTNND2-005 protein_coding Homo_sapiens 0 3478
ENST00000513588 CTNND2-002 nonsense_mediated_decay Homo_sapiens 0 3125
ENST00000513598 CTNND2-012 protein_coding Homo_sapiens 0 813
ENST00000514132 CTNND2-014 processed_transcript Homo_sapiens 0 300

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