C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin-associated protein), delta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304623 CTNND2-001 ENSG00000169862 9606 - 5:10971840-11904043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLungOvaryPlacentaTestisENST00000304623
Transcript ID Brain Heart Kidney Lung Ovary Placenta Testis
ENST00000304623 18.289±8.13 0.636±0.00 0.008±0.00 0.173±0.10 0.268±0.26 0.230±0.07 0.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ML CIL_0006ML_0002 CGP 5:10679230-11904043

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001763 IEA morphogenesis of a branching structure
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 TAS cell adhesion
GO:0007165 TAS signal transduction
GO:0007275 IEA multicellular organismal development
GO:0007612 IEA learning
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030054 IEA cell junction
GO:0048167 IEA regulation of synaptic plasticity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081728 Ctnnd2-201 protein_coding Mus_musculus 0 3941
ENSDART00000066665 ctnnd2a-201 protein_coding Danio_rerio 0 1417
ENSDART00000148197 ctnnd2a-001 protein_coding Danio_rerio 0 1417

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