C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081980 Med9-001 ENSMUSG00000061650 10090 + 11:59948206-59962205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081980 16.588±0.76 28.737±0.91 7.610±0.46 7.946±1.72 9.701±3.54 11.458±2.24 8.769±0.62 9.863±2.23 6.316±3.17 9.924±0.88 8.084±0.65 19.150±5.84 8.776±2.73 15.074±4.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0002 VISTA 11:59693037-60296757
CIL_0000NW CIL_0000NW_0002 CGP 11:59839447-59962205
CIL_0000NV CIL_0000NV_0002 CGP 11:59948206-59964944

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0008150 ND biological_process
GO:0016592 IDA mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268711 MED9-001 protein_coding Homo_sapiens 0 405
ENST00000588528 RP11-219G17.6-001 processed_pseudogene Homo_sapiens 1.00053e-42 176

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