C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082057 Gtf2i-201 ENSMUSG00000060261 10090 - 5:134237837-134314746 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0014886 IDA transition between slow and fast fiber
GO:0042995 IDA cell projection
GO:0043025 IDA neuronal cell body
GO:0051019 IDA mitogen-activated protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000434037 AC005077.12-002 processed_transcript Homo_sapiens 2e-23 115
ENST00000436677 AC005077.12-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 198
ENST00000438130 GTF2I-012 processed_transcript Homo_sapiens 0 725
ENST00000443166 GTF2I-004 protein_coding Homo_sapiens 0 918
ENST00000453092 RP11-396K3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 2338
ENST00000464471 GTF2I-016 retained_intron Homo_sapiens 0 291
ENST00000476035 GTF2I-014 retained_intron Homo_sapiens 0 403
ENST00000490431 GTF2I-021 retained_intron Homo_sapiens 0 267
ENST00000491325 GTF2I-008 processed_transcript Homo_sapiens 0 520
ENST00000502460 GS1-124K5.6-001 unprocessed_pseudogene Homo_sapiens 0 191
ENST00000526931 RP11-227P3.1-001 unprocessed_pseudogene Homo_sapiens 3e-19 99
ENST00000544802 RP11-396K3.1-002 processed_transcript Homo_sapiens 0 2486
ENST00000573035 GTF2I-001 protein_coding Homo_sapiens 0 2507
ENST00000613513 GTF2I-018 processed_transcript Homo_sapiens 6.99949e-42 174
ENST00000614048 GTF2I-006 retained_intron Homo_sapiens 6.02558e-44 183
ENST00000614592 GTF2IP1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 2327
ENST00000614986 GTF2I-002 protein_coding Homo_sapiens 0 2507
ENST00000615592 GTF2IP1-008 retained_intron Homo_sapiens 0 403
ENST00000615596 GTF2I-009 retained_intron Homo_sapiens 0 442
ENST00000616377 GTF2IP1-010 processed_transcript Homo_sapiens 0 2346
ENST00000618412 GTF2IP1-003 retained_intron Homo_sapiens 0 237
ENST00000620631 GTF2I-011 processed_transcript Homo_sapiens 0 706
ENST00000620879 GTF2I-017 protein_coding Homo_sapiens 0 2556
ENST00000621040 GTF2I-005 retained_intron Homo_sapiens 0 237
ENST00000621640 GTF2I-022 retained_intron Homo_sapiens 0 412
ENST00000621734 GTF2I-003 protein_coding Homo_sapiens 0 3533
ENST00000621948 GTF2IP1-004 retained_intron Homo_sapiens 6.02558e-44 183
ENST00000622399 GTF2IP1-005 processed_transcript Homo_sapiens 0 701
ENST00000622829 GTF2IP1-002 processed_transcript Homo_sapiens 0 2484

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