C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544802 RP11-396K3.1-002 ENSG00000233369 9606 + 7:73154938-73207283 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000544802
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000544802 1.041±0.00 0.258±0.00 0.295±0.00 0.019±0.00 0.068±0.00 0.152±0.00 0.280±0.00 0.373±0.00 0.200±0.10 0.400±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082057 Gtf2i-201 protein_coding Mus_musculus 0 2486
ENSMUST00000111261 Gtf2i-202 protein_coding Mus_musculus 0 2486
ENSMUST00000174772 Gtf2i-006 protein_coding Mus_musculus 0 2486
ENSMUST00000174513 Gtf2i-005 protein_coding Mus_musculus 0 2486
ENSMUST00000174155 Gtf2i-003 protein_coding Mus_musculus 0 2486
ENSMUST00000174354 Gtf2i-004 protein_coding Mus_musculus 0 2486
ENSMUST00000172904 Gtf2i-009 processed_transcript Mus_musculus 0 2486
ENSMUST00000059042 Gtf2i-001 protein_coding Mus_musculus 0 2486
ENSMUST00000173341 Gtf2i-002 protein_coding Mus_musculus 0 2436
ENSMUST00000173888 Gtf2i-017 protein_coding Mus_musculus 0 2342
ENSMUST00000172715 Gtf2i-008 protein_coding Mus_musculus 0 2340
ENSMUST00000174182 Gtf2i-016 retained_intron Mus_musculus 0 734
ENSMUST00000174133 Gtf2i-025 protein_coding Mus_musculus 0 693
ENSMUST00000174003 Gtf2i-020 retained_intron Mus_musculus 0 645
ENSMUST00000173485 Gtf2i-022 protein_coding Mus_musculus 0 542
ENSMUST00000172553 Gtf2i-023 retained_intron Mus_musculus 0 231
ENSMUST00000016088 Gatsl2-001 protein_coding Mus_musculus 0 213

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