C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spire homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082243 Spire1-202 ENSMUSG00000024533 10090 - 18:67488213-67552777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryENSMUST00000082243
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary
ENSMUST00000082243 0.855±0.00 5.311±2.26 0.621±0.15 0.266±0.09 0.425±0.11 2.810±1.97 0.742±0.21 0.603±0.20 2.301±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_00010Z CIL_00010Z_0002 CGP 18:67464849-67552777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005794 IDA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005938 IDA cell cortex
GO:0015031 IEA protein transport
GO:0016192 IMP vesicle-mediated transport
GO:0030036 IMP actin cytoskeleton organization
GO:0030659 IDA cytoplasmic vesicle membrane
GO:0032154 IDA cleavage furrow
GO:0036089 IMP cleavage furrow formation
GO:0040038 IMP polar body extrusion after meiotic divisions
GO:0046907 IMP intracellular transport
GO:0048193 IDA Golgi vesicle transport
GO:0051295 IMP establishment of meiotic spindle localization
GO:0070649 IMP formin-nucleated actin cable assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309836 SPIRE1-005 protein_coding Homo_sapiens 0 1218
ENST00000409402 SPIRE1-001 protein_coding Homo_sapiens 0 2196
ENST00000410092 SPIRE1-002 protein_coding Homo_sapiens 0 1240
ENST00000440472 SPIRE1-003 nonsense_mediated_decay Homo_sapiens 0 1090
ENST00000449797 SPIRE1-006 protein_coding Homo_sapiens 0 593
ENST00000453447 SPIRE1-010 protein_coding Homo_sapiens 0 1218
ENST00000462226 SPIRE1-004 protein_coding Homo_sapiens 0 326
ENST00000464481 SPIRE1-008 processed_transcript Homo_sapiens 0 763
ENST00000487491 SPIRE1-007 processed_transcript Homo_sapiens 0 499
ENST00000497844 SPIRE1-011 protein_coding Homo_sapiens 0 353
ENST00000498803 SPIRE1-009 retained_intron Homo_sapiens 0 520
ENST00000588236 SPIRE1-013 retained_intron Homo_sapiens 0 580
ENST00000592156 SPIRE1-012 nonsense_mediated_decay Homo_sapiens 0 760

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