C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084519 Wdr11-001 ENSMUSG00000042055 10090 + 7:129591863-129635738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084519
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084519 7.624±1.56 4.449±1.98 5.185±0.12 5.945±2.29 4.109±1.05 6.469±1.29 3.159±0.74 7.358±0.57 4.368±0.81 8.262±1.92 5.779±0.43 6.248±2.86 6.024±2.24 9.730±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WK CIL_0002WK_0002 CGP 7:129257094-129635738
CIL_0008MH CIL_0008MH_0002 VISTA 7:129443441-130044988
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISO cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005929 IDA cilium
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263461 WDR11-001 protein_coding Homo_sapiens 0 4205
ENST00000478567 WDR11-003 processed_transcript Homo_sapiens 0 549
ENST00000497136 WDR11-002 nonsense_mediated_decay Homo_sapiens 0 2409
ENST00000603658 WDR11-014 retained_intron Homo_sapiens 0 398
ENST00000604220 WDR11-018 processed_transcript Homo_sapiens 0 529
ENST00000604509 WDR11-006 processed_transcript Homo_sapiens 0 1210
ENST00000604585 WDR11-016 protein_coding Homo_sapiens 0 1757
ENST00000605069 WDR11-008 processed_transcript Homo_sapiens 0 575
ENST00000605202 WDR11-009 processed_transcript Homo_sapiens 0 555
ENST00000605376 WDR11-011 processed_transcript Homo_sapiens 0 562
ENST00000605543 WDR11-007 nonsense_mediated_decay Homo_sapiens 0 2567

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