C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084521 Rgs3-005 ENSMUSG00000059810 10090 + 4:62619520-62703018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000084521
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000084521 3.839±0.53 2.608±0.67 4.277±1.27 5.221±1.72 3.084±1.13 1.881±0.12 1.175±0.09 0.474±0.16 8.636±1.75 0.608±0.23 5.009±0.86 1.156±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D0 CIL_0004D0_0002 CGP 4:62525369-62704001
CIL_0002CA CIL_0002CA_0003 CGP 4:62559847-63139708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005634 IDA nucleus
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317613 RGS3-002 protein_coding Homo_sapiens 0 1387
ENST00000342620 RGS3-201 protein_coding Homo_sapiens 0 905
ENST00000343817 RGS3-006 protein_coding Homo_sapiens 0 1805
ENST00000350696 RGS3-202 protein_coding Homo_sapiens 0 1531
ENST00000374134 RGS3-007 protein_coding Homo_sapiens 0 1509
ENST00000374136 RGS3-013 protein_coding Homo_sapiens 0 1387
ENST00000374140 RGS3-001 protein_coding Homo_sapiens 0 1531
ENST00000394646 RGS3-203 protein_coding Homo_sapiens 0 1663
ENST00000460000 RGS3-025 retained_intron Homo_sapiens 0 497
ENST00000462143 RGS3-017 protein_coding Homo_sapiens 0 1509
ENST00000462403 RGS3-008 protein_coding Homo_sapiens 0 905
ENST00000464306 RGS3-028 processed_transcript Homo_sapiens 0 514
ENST00000466314 RGS3-027 processed_transcript Homo_sapiens 0 496
ENST00000467805 RGS3-003 protein_coding Homo_sapiens 0 484
ENST00000470775 RGS3-023 processed_transcript Homo_sapiens 0 381
ENST00000471324 RGS3-019 protein_coding Homo_sapiens 1e-34 150
ENST00000478599 RGS3-015 retained_intron Homo_sapiens 0 1531
ENST00000485822 RGS3-014 retained_intron Homo_sapiens 0 606
ENST00000487344 RGS3-018 retained_intron Homo_sapiens 0 1509
ENST00000488620 RGS3-011 retained_intron Homo_sapiens 0 606
ENST00000490241 RGS3-009 retained_intron Homo_sapiens 0 771
ENST00000492676 RGS3-022 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000496113 RGS3-026 protein_coding Homo_sapiens 0 638
ENST00000496264 RGS3-024 processed_transcript Homo_sapiens 0 383
ENST00000613049 RGS3-204 protein_coding Homo_sapiens 0 905
ENST00000620489 RGS3-030 protein_coding Homo_sapiens 0 905

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