C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084731 Ipo7-201 ENSMUSG00000066232 10090 + 7:110018425-110055114 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000084731
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000084731 8.337±1.25 3.906±0.00 10.579±0.00 6.247±0.40 5.147±0.92 3.271±0.71 7.320±0.42 7.704±0.24 4.799±1.21 10.550±8.62 14.670±5.44 12.673±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CP CIL_0009CP_0002 VISTA 7:109862809-110466321
CIL_0001HI CIL_0001HI_0003 CGP 7:109972187-110055114

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0008536 IEA Ran GTPase binding
GO:0016020 IEA membrane
GO:0042393 IDA histone binding
GO:0045087 IMP innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379719 IPO7-001 protein_coding Homo_sapiens 0 4471
ENST00000442031 IPO7P1-001 processed_pseudogene Homo_sapiens 0 686
ENST00000451446 IPO7P2-001 processed_pseudogene Homo_sapiens 0 1646
ENST00000455509 IPO8P1-001 processed_pseudogene Homo_sapiens 0 3533
ENST00000527431 IPO7-003 protein_coding Homo_sapiens 0 545
ENST00000528833 IPO7-006 retained_intron Homo_sapiens 0 224
ENST00000530037 IPO7-005 retained_intron Homo_sapiens 0 433
ENST00000531235 IPO7-004 retained_intron Homo_sapiens 0 241
ENST00000533233 IPO7-002 nonsense_mediated_decay Homo_sapiens 0 351

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