C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cannabinoid receptor 1 (brain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084736 Cnr1-003 ENSMUSG00000044288 10090 + 4:33926202-33948819 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000084736
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000084736 1.071±0.00 4.319±1.27 4.217±0.80 0.357±0.22 0.388±0.17 0.062±0.01 0.063±0.04 0.038±0.00 0.349±0.06 0.294±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004949 ISS cannabinoid receptor activity
GO:0005886 IEA plasma membrane
GO:0007188 ISS adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007413 IMP axonal fasciculation
GO:0016021 IEA integral component of membrane
GO:0030424 IDA axon
GO:0030426 IDA growth cone
GO:0042593 IPI glucose homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000362094 CNR1-003 protein_coding Homo_sapiens 0 1552
ENST00000369499 CNR1-006 protein_coding Homo_sapiens 0 2503
ENST00000369501 CNR1-001 protein_coding Homo_sapiens 0 2468
ENST00000428600 CNR1-005 protein_coding Homo_sapiens 0 1923
ENST00000468898 CNR1-004 protein_coding Homo_sapiens 0 1628
ENST00000549890 CNR1-002 protein_coding Homo_sapiens 0 2183
ENST00000551417 CNR1-007 protein_coding Homo_sapiens 0 355

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