C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC condensin II complex, subunit G2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084828 Ncapg2-201 ENSMUSG00000042029 10090 + 12:116405402-116463531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084828 0.705±0.45 0.600±0.13 0.634±0.14 1.749±1.22 0.737±0.23 0.971±0.27 0.131±0.11 0.280±0.14 5.671±6.17 0.484±0.13 0.199±0.03 1.388±0.67 1.643±1.08 2.076±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038K CIL_00038K_0002 CGP 12:116281222-116463531
CIL_0005H8 CIL_0005H8_0002 CGP 12:116405402-117276849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001833 IMP inner cell mass cell proliferation
GO:0005515 IPI protein binding
GO:0007067 IEA mitotic nuclear division
GO:0016020 IEA membrane
GO:0030261 IEA chromosome condensation
GO:0035064 IEA methylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356309 NCAPG2-001 protein_coding Homo_sapiens 0 3140
ENST00000409339 NCAPG2-003 protein_coding Homo_sapiens 0 3105
ENST00000409423 NCAPG2-004 protein_coding Homo_sapiens 0 3140
ENST00000432615 NCAPG2-005 nonsense_mediated_decay Homo_sapiens 0 1264
ENST00000441982 NCAPG2-007 protein_coding Homo_sapiens 0 2172
ENST00000467785 NCAPG2-006 retained_intron Homo_sapiens 0 2095
ENST00000621338 NCAPG2-008 processed_transcript Homo_sapiens 5e-24 115

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