C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptic vesicle glycoprotein 2 b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085164 Sv2b-201 ENSMUSG00000053025 10090 - 7:75114897-75308386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085164 0.172±0.20 0.019±0.00 0.617±0.00 11.579±15.66 0.071±0.02 0.240±0.11 0.098±0.02 0.014±0.00 0.009±0.00 0.068±0.02 0.067±0.05 0.870±0.51 0.075±0.04 0.241±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006836 IEA neurotransmitter transport
GO:0007268 TAS synaptic transmission
GO:0008021 IDA synaptic vesicle
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0030054 IEA cell junction
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330276 SV2B-201 protein_coding Homo_sapiens 0 3007
ENST00000394232 SV2B-001 protein_coding Homo_sapiens 0 3007
ENST00000545111 SV2B-002 protein_coding Homo_sapiens 0 2126
ENST00000553727 SV2B-005 retained_intron Homo_sapiens 0 392
ENST00000557410 SV2B-003 nonsense_mediated_decay Homo_sapiens 0 2915

Loading