C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085708 Stat2-201 ENSMUSG00000040033 10090 + 10:128270576-128292849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085708
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085708 4.957±0.26 4.641±1.45 5.324±0.39 4.384±0.98 5.870±1.31 2.611±1.06 2.048±0.29 2.084±0.57 7.831±2.73 3.860±1.33 0.975±0.38 5.474±2.78 8.910±2.42 0.784±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314128 STAT2-002 protein_coding Homo_sapiens 0 1561
ENST00000418572 STAT2-004 protein_coding Homo_sapiens 0 765
ENST00000555646 STAT2-009 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000556140 STAT2-005 retained_intron Homo_sapiens 0 302
ENST00000557235 STAT2-001 protein_coding Homo_sapiens 0 1517
ENST00000557417 STAT2-006 retained_intron Homo_sapiens 4e-32 143

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