C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 7, T cell specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086844 Tcf7-001 ENSMUSG00000000782 10090 - 11:52252371-52282571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000086844
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000086844 1.572±0.57 1.009±0.00 13.883±4.76 0.922±0.24 0.372±0.12 1.461±0.69 0.978±0.59 2.514±0.32 0.506±0.73 6.321±3.69 1.316±0.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003682 IBA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005667 IBA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0007420 IBA brain development
GO:0008013 IBA beta-catenin binding
GO:0016055 IDA Wnt signaling pathway
GO:0021915 IGI neural tube development
GO:0030538 IGI embryonic genitalia morphogenesis
GO:0033153 IGI T cell receptor V(D)J recombination
GO:0042127 IDA regulation of cell proliferation
GO:0043565 IBA sequence-specific DNA binding
GO:0044212 IBA transcription regulatory region DNA binding
GO:0044336 IDA canonical Wnt signaling pathway involved in negative regulation of apoptotic process
GO:0046632 IGI alpha-beta T cell differentiation
GO:0048557 IGI embryonic digestive tract morphogenesis
GO:0048619 IGI embryonic hindgut morphogenesis
GO:0048699 IBA generation of neurons
GO:0071353 IEA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342854 TCF7-001 protein_coding Homo_sapiens 0 944
ENST00000378560 TCF7-004 protein_coding Homo_sapiens 0 610
ENST00000395023 TCF7-003 protein_coding Homo_sapiens 0 944
ENST00000395029 TCF7-002 protein_coding Homo_sapiens 0 610
ENST00000517478 TCF7-021 processed_transcript Homo_sapiens 0 350
ENST00000517741 TCF7-020 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000517799 TCF7-009 protein_coding Homo_sapiens 0 562
ENST00000517851 TCF7-011 protein_coding Homo_sapiens 0 697
ENST00000517855 TCF7-023 protein_coding Homo_sapiens 0 647
ENST00000518915 TCF7-006 protein_coding Homo_sapiens 0 610
ENST00000519238 TCF7-008 retained_intron Homo_sapiens 0 950
ENST00000520652 TCF7-018 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000520699 TCF7-022 protein_coding Homo_sapiens 0 366
ENST00000520958 TCF7-024 protein_coding Homo_sapiens 0 944
ENST00000522375 TCF7-015 protein_coding Homo_sapiens 0 628
ENST00000522561 TCF7-019 retained_intron Homo_sapiens 0 453
ENST00000522653 TCF7-005 retained_intron Homo_sapiens 0 894
ENST00000524342 TCF7-007 retained_intron Homo_sapiens 0 553

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