C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7027
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086958 Gm7027-001 ENSMUSG00000067121 10090 - 7:101573460-101574321 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086958 3.231±0.44 1.791±0.84 0.088±0.01 0.451±0.44 1.323±0.47 1.773±0.84 1.096±0.17 1.603±0.54 1.950±1.86 0.904±0.29 0.080±0.02 3.229±2.43 0.062±0.03 0.879±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0002 VISTA 7:101413526-102014552

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000202773 RPL6-001 protein_coding Homo_sapiens 0 723
ENST00000424576 RPL6-002 protein_coding Homo_sapiens 0 723
ENST00000443382 RPL6P30-001 processed_pseudogene Homo_sapiens 0 525
ENST00000489915 RPL6P27-001 transcribed_processed_pseudogene Homo_sapiens 0 717
ENST00000553205 RPL6-014 retained_intron Homo_sapiens 6e-25 119
ENST00000583065 RPL6P27-002 processed_transcript Homo_sapiens 0 599
ENST00000605661 RP11-107F6.4-001 processed_pseudogene Homo_sapiens 0 196

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