C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086975 Gpr55-001 ENSMUSG00000049608 10090 - 1:85938318-85961007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086975 0.121±0.09 0.740±0.13 0.043±0.01 0.243±0.00 0.418±0.09 0.450±0.07 0.010±0.00 0.019±0.00 0.050±0.04 0.463±0.12 0.020±0.02 0.273±0.11 0.815±1.03 2.178±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076O CIL_00076O_0002 CGP 1:85938318-86029958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004949 IEA cannabinoid receptor activity
GO:0005887 ISS integral component of plasma membrane
GO:0007202 ISS activation of phospholipase C activity
GO:0035025 ISS positive regulation of Rho protein signal transduction
GO:0038171 IEA cannabinoid signaling pathway
GO:0045453 IEA bone resorption
GO:0045671 IEA negative regulation of osteoclast differentiation
GO:0070374 ISS positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392039 GPR55-001 protein_coding Homo_sapiens 0 575
ENST00000392040 GPR55-201 protein_coding Homo_sapiens 0 575
ENST00000438398 GPR55-003 protein_coding Homo_sapiens 0 575
ENST00000444078 GPR55-002 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000622008 GPR55-202 protein_coding Homo_sapiens 0 575

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