C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087031 Xpo5-201 ENSMUSG00000067150 10090 + 17:46202855-46242299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000087031
Transcript ID Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000087031 6.296±0.00 5.626±0.00 1.539±0.00 6.126±0.00 6.356±3.42 5.360±3.05 9.188±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IDA tRNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006611 IDA protein export from nucleus
GO:0008536 IEA Ran GTPase binding
GO:0008565 IDA protein transporter activity
GO:0031047 IEA gene silencing by RNA
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265351 XPO5-001 protein_coding Homo_sapiens 0 4043
ENST00000398799 XPO5-010 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000398835 XPO5-013 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000424378 XPO5-011 processed_transcript Homo_sapiens 0 499
ENST00000455285 XPO5-015 protein_coding Homo_sapiens 0 492
ENST00000455854 XPO5-009 retained_intron Homo_sapiens 0 590
ENST00000486936 XPO5-005 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000488195 XPO5-006 retained_intron Homo_sapiens 0 568
ENST00000496341 XPO5-012 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000612911 XPO5-014 retained_intron Homo_sapiens 0 396

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