C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglucomutase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087324 Pgm1-001 ENSMUSG00000029171 10090 + 5:64092936-64128355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087324 4.388±2.27 1.952±0.62 13.686±0.03 4.866±3.25 3.979±1.45 16.076±2.15 1.358±0.07 3.370±0.43 4.371±3.36 5.310±0.85 0.428±0.25 5.447±4.10 19.374±13.73 0.373±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FG CIL_0002FG_0002 CGP 5:63908896-64128355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004614 IDA phosphoglucomutase activity
GO:0005829 IBA cytosol
GO:0005978 IBA glycogen biosynthetic process
GO:0006006 IDA glucose metabolic process
GO:0008973 IEA phosphopentomutase activity
GO:0019388 IBA galactose catabolic process
GO:0046386 IEA deoxyribose phosphate catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381967 PGM2-001 protein_coding Homo_sapiens 0 1943
ENST00000510084 PGM2-005 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000512556 PGM2-004 nonsense_mediated_decay Homo_sapiens 0 1546

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