C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 20B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087341 Kif20b-201 ENSMUSG00000024795 10090 + 19:34922358-34975731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087341 0.183±0.14 0.054±0.00 0.301±0.00 0.329±0.14 0.102±0.07 0.316±0.10 0.029±0.01 0.077±0.02 3.373±2.85 0.112±0.07 0.032±0.03 0.801±1.18 4.600±2.81 3.116±3.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IR CIL_0001IR_0002 CGP 19:34810894-34975731
CIL_0005PF CIL_0005PF_0003 CGP 19:34922358-36057507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0003777 IEA microtubule motor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005874 IEA microtubule
GO:0006200 IEA ATP catabolic process
GO:0007018 IEA microtubule-based movement
GO:0007067 IEA mitotic nuclear division
GO:0007088 IEA regulation of mitosis
GO:0008017 IEA microtubule binding
GO:0016887 IEA ATPase activity
GO:0050699 IEA WW domain binding
GO:0070201 IDA regulation of establishment of protein localization
GO:2000114 IGI regulation of establishment of cell polarity
GO:2001222 IGI regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260753 KIF20B-001 protein_coding Homo_sapiens 0 2117
ENST00000371728 KIF20B-003 protein_coding Homo_sapiens 0 2182
ENST00000447580 KIF20B-004 protein_coding Homo_sapiens 0 669
ENST00000478929 KIF20B-005 processed_transcript Homo_sapiens 0 2117

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