C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071009-ENSDARG00000056949 CGP 7955 17:23300801-23375543
GeneTranscriptPositionBiotype
ENSDARG00000056949 (HTR7 (1 of 2))
5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 		ENSDART00000079534 (HTR7 (1 of 2)-001) 23371942-23375543 protein_coding
ENSDARG00000071009 (kif20ba)
kinesin family member 20Ba 		ENSDART00000104718 (kif20ba-201) 23301342-23338530 protein_coding
ENSDART00000154716 (kif20ba-001) 23300801-23339379 protein_coding
ENSDART00000155150 (kif20ba-004) 23324525-23338066 protein_coding
ENSDART00000156068 (kif20ba-003) 23310878-23312448 retained_intron
ENSDART00000157186 (kif20ba-002) 23300947-23302991 retained_intron
CIL_0005PF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138182-ENSG00000148680 CGP 9606 10:89701610-90857698
GeneTranscriptPositionBiotype
ENSG00000138182 (KIF20B)
kinesin family member 20B 		ENST00000260753 (KIF20B-001) 89701610-89774939 protein_coding
ENST00000371728 (KIF20B-003) 89701617-89774939 protein_coding
ENST00000447580 (KIF20B-004) 89701679-89711090 protein_coding
ENST00000478929 (KIF20B-005) 89723576-89774939 processed_transcript
ENSG00000148680 (HTR7)
5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 		ENST00000277874 (HTR7-002) 90740823-90857698 protein_coding
ENST00000336152 (HTR7-001) 90740823-90857698 protein_coding
ENST00000371719 (HTR7-003) 90740823-90857698 protein_coding
ENSG00000226159 (LINC01375)
long intergenic non-protein coding RNA 1375 		ENST00000428485 (LINC01375-001) 89915489-89957373 lincRNA
ENSG00000228938 (SNRPD2P1)
small nuclear ribonucleoprotein D2 pseudogene 1 		ENST00000489253 (SNRPD2P1-001) 89978717-89979070 processed_pseudogene
ENSG00000232229 (LINC00865)
long intergenic non-protein coding RNA 865 		ENST00000448490 (LINC00865-002) 89829556-89840861 lincRNA
ENST00000448963 (LINC00865-001) 89829510-89840861 lincRNA
ENSG00000236373 (RP11-15K3.1)
 ENST00000418379 (RP11-15K3.1-001) 90402521-90540805 lincRNA
ENSG00000238291 (RP11-94M14.3)
 ENST00000425365 (RP11-94M14.3-001) 90462717-90467952 lincRNA
ENSG00000270670 (RP11-248C1.3)
 ENST00000605714 (RP11-248C1.3-001) 89837612-89839334 processed_pseudogene
CIL_0005PF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024795-ENSMUSG00000024798 CGP 10090 19:34922358-36057507
GeneTranscriptPositionBiotype
ENSMUSG00000024795 (Kif20b)
kinesin family member 20B 		ENSMUST00000087341 (Kif20b-201) 34922358-34975731 protein_coding
ENSMUSG00000024798 (Htr7)
5-hydroxytryptamine (serotonin) receptor 7 		ENSMUST00000099505 (Htr7-006) 35960315-36057373 protein_coding
ENSMUST00000164639 (Htr7-001) 35958734-36057340 protein_coding
ENSMUST00000164781 (Htr7-004) 35958734-36057360 nonsense_mediated_decay
ENSMUST00000165215 (Htr7-002) 35958734-36057360 nonsense_mediated_decay
ENSMUST00000166074 (Htr7-005) 35958745-36057368 protein_coding
ENSMUST00000170360 (Htr7-003) 35959820-36057507 nonsense_mediated_decay
ENSMUSG00000094707 (A830019P07Rik)
RIKEN cDNA A830019P07 gene 		ENSMUST00000178904 (A830019P07Rik-001) 35835221-35924578 lincRNA
ENSMUSG00000101966 (Gm5248)
predicted gene 5248 		ENSMUST00000186108 (Gm5248-001) 35051202-35055247 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PF_0001ENSDARG00000056949ENSDART00000079534ENSDARG00000071009ENSDART00000104718ENSDART00000154716ENSDART00000155150ENSDART00000156068ENSDART00000157186CIL_0005PF_0002ENSG00000138182ENST00000260753ENST00000371728ENST00000447580ENST00000478929ENSG00000148680ENST00000277874ENST00000336152ENST00000371719ENSG00000226159ENST00000428485ENSG00000228938ENST00000489253ENSG00000232229ENST00000448490ENST00000448963ENSG00000236373ENST00000418379ENSG00000238291ENST00000425365ENSG00000270670ENST00000605714CIL_0005PF_0003ENSMUSG00000024795ENSMUST00000087341ENSMUSG00000024798ENSMUST00000099505ENSMUST00000164639ENSMUST00000164781ENSMUST00000165215ENSMUST00000166074ENSMUST00000170360ENSMUSG00000094707ENSMUST00000178904ENSMUSG00000101966ENSMUST00000186108
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PF_0001ENSDARG00000056949ENSDART00000079534ENSDARG00000071009ENSDART00000104718ENSDART00000154716ENSDART00000155150ENSDART00000157186CIL_0005PF_0002ENSG00000138182ENST00000260753ENST00000371728ENST00000447580ENST00000478929ENSG00000148680ENST00000277874ENST00000336152ENST00000371719ENSG00000226159ENST00000428485ENSG00000228938ENST00000489253ENSG00000232229ENST00000448490ENSG00000236373ENST00000418379ENSG00000238291ENST00000425365ENSG00000270670ENST00000605714CIL_0005PF_0003ENSMUSG00000024795ENSMUST00000087341ENSMUSG00000024798ENSMUST00000099505ENSMUST00000164639ENSMUST00000164781ENSMUST00000165215ENSMUST00000166074ENSMUST00000170360ENSMUSG00000094707ENSMUST00000178904ENSMUSG00000101966ENSMUST00000186108
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056949 ENSDART00000079534 N/A N/A N/A 2.249±1.13 N/A N/A 0.047±0.00 N/A 0.020±0.00 N/A 0.238±0.00 N/A N/A N/A
ENSDARG00000071009 ENSDART00000104718 N/A N/A N/A 0.069±0.00 N/A N/A 0.200±0.00 2.557±0.00 N/A N/A 0.051±0.00 N/A N/A N/A
ENSDART00000154716 N/A N/A N/A 0.177±0.12 N/A N/A 0.079±0.07 0.773±0.00 0.125±0.00 N/A N/A N/A N/A N/A
ENSDART00000155150 N/A N/A N/A 0.820±0.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138182 ENST00000260753 0.359±0.00 0.241±0.00 N/A 0.144±0.00 1.944±0.00 1.213±0.99 0.168±0.04 0.179±0.00 0.470±0.37 0.297±0.00 N/A 1.616±1.39 0.755±0.91 3.825±2.33
ENST00000371728 N/A N/A 0.172±0.00 N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A 1.032±0.00
ENST00000447580 N/A N/A 0.829±0.00 N/A N/A N/A N/A 1.107±0.00 N/A N/A N/A N/A N/A N/A
ENST00000478929 N/A 0.626±0.00 0.077±0.00 0.144±0.05 0.194±0.00 N/A N/A 0.380±0.00 0.082±0.00 0.178±0.11 0.034±0.01 1.783±1.79 0.330±0.28 1.402±0.51
ENSG00000148680 ENST00000277874 0.053±0.00 0.174±0.00 0.027±0.00 0.113±0.03 0.113±0.00 0.211±0.11 0.070±0.00 0.101±0.00 0.045±0.00 0.063±0.00 N/A 0.106±0.03 0.098±0.07 2.853±0.27
ENST00000336152 N/A N/A N/A 0.608±0.00 0.403±0.00 N/A 0.024±0.00 N/A 0.620±0.00 N/A N/A 0.089±0.00 0.102±0.00 3.075±0.97
ENST00000371719 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A 0.005±0.00 0.599±0.00 N/A 0.142±0.00 0.120±0.00 5.273±4.50
ENSG00000226159 ENST00000428485 N/A N/A N/A N/A 0.106±0.00 N/A 0.016±0.00 N/A N/A 0.095±0.00 N/A N/A N/A 0.116±0.01
ENSG00000228938 ENST00000489253 0.055±0.00 N/A N/A N/A 1.279±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.080±0.00
ENSG00000232229 ENST00000448490 0.062±0.00 0.115±0.00 0.119±0.00 0.601±0.32 0.150±0.02 0.732±0.27 0.039±0.02 0.253±0.00 0.018±0.00 0.127±0.03 N/A 0.360±0.19 0.606±0.00 11.051±7.67
ENST00000448963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236373 ENST00000418379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.04
ENSG00000238291 ENST00000425365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.309±0.00 N/A N/A 0.019±0.00
ENSG00000270670 ENST00000605714 0.165±0.00 N/A 0.029±0.00 0.123±0.00 N/A 1.079±0.00 0.024±0.00 N/A 1.558±1.52 0.274±0.00 N/A 0.374±0.27 0.573±0.00 21.031±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024795 ENSMUST00000087341 0.183±0.14 0.054±0.00 0.301±0.00 0.329±0.14 0.102±0.07 0.316±0.10 0.029±0.01 0.077±0.02 3.373±2.85 0.112±0.07 0.032±0.03 0.801±1.18 4.600±2.81 3.116±3.24
ENSMUSG00000024798 ENSMUST00000099505 N/A 0.049±0.01 N/A N/A 0.297±0.09 0.143±0.10 0.039±0.01 N/A 0.025±0.01 0.071±0.02 N/A 0.134±0.06 0.004±0.00 0.041±0.02
ENSMUST00000164639 0.298±0.00 N/A 0.008±0.00 0.840±0.23 0.139±0.09 0.040±0.01 0.106±0.05 0.045±0.00 0.010±0.01 0.103±0.07 0.255±0.08 0.097±0.07 0.018±0.01 0.030±0.00
ENSMUST00000164781 N/A N/A N/A N/A 0.190±0.00 0.052±0.00 N/A 0.025±0.02 N/A N/A N/A 0.138±0.09 N/A N/A
ENSMUST00000165215 0.208±0.00 0.065±0.00 N/A 0.548±0.14 N/A 0.054±0.00 0.156±0.00 0.028±0.02 N/A N/A 0.387±0.00 0.027±0.00 N/A N/A
ENSMUST00000166074 0.165±0.00 N/A 0.086±0.00 0.626±0.10 0.052±0.00 N/A N/A N/A 0.001±0.00 N/A 0.148±0.00 0.003±0.00 0.002±0.00 N/A
ENSMUST00000170360 N/A 0.155±0.03 0.020±0.00 N/A 0.244±0.06 0.153±0.10 0.115±0.02 0.072±0.00 0.017±0.00 0.198±0.05 0.065±0.00 0.100±0.08 N/A 0.067±0.00
ENSMUSG00000094707 ENSMUST00000178904 0.146±0.10 N/A 0.103±0.02 0.048±0.00 0.052±0.01 N/A 0.094±0.06 0.043±0.03 0.005±0.00 0.123±0.06 0.044±0.01 0.050±0.03 0.018±0.01 0.030±0.00
ENSMUSG00000101966 ENSMUST00000186108 0.008±0.00 0.062±0.02 N/A 0.003±0.00 0.026±0.02 0.024±0.00 0.013±0.00 0.032±0.02 0.004±0.00 0.053±0.03 N/A 0.104±0.07 0.004±0.00 0.018±0.01

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