C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AE binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087614 Aebp2-002 ENSMUSG00000030232 10090 + 6:140623499-140652826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087614
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087614 3.400±0.00 3.177±0.53 9.783±0.72 6.445±3.18 5.693±1.05 2.934±0.60 1.882±0.06 3.525±1.45 6.616±2.56 7.400±3.24 2.201±0.47 4.210±0.57 10.451±5.25 3.888±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FL CIL_0005FL_0002 CGP 6:140424099-140678472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0035098 IDA ESC/E(Z) complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266508 AEBP2-003 protein_coding Homo_sapiens 0 3323
ENST00000360995 AEBP2-004 protein_coding Homo_sapiens 0 1168
ENST00000398731 AEBP2-007 protein_coding Homo_sapiens 0 442
ENST00000398864 AEBP2-002 protein_coding Homo_sapiens 0 1838
ENST00000512223 AEBP2-008 protein_coding Homo_sapiens 0 496
ENST00000541908 AEBP2-006 protein_coding Homo_sapiens 0 1279

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