C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AE binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398864 AEBP2-002 ENSG00000139154 9606 + 12:19439674-19522239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398864
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398864 0.837±0.00 1.262±0.00 0.568±0.21 0.622±0.00 1.226±0.78 0.755±0.00 0.784±0.50 0.295±0.00 1.385±0.54 0.348±0.20 2.115±0.11 0.620±0.05 2.181±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FL CIL_0005FL_0001 CGP 12:19129752-19720801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0003714 IEA transcription corepressor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0035098 IDA ESC/E(Z) complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161335 Aebp2-005 protein_coding Mus_musculus 0 2174
ENSMUST00000087614 Aebp2-002 protein_coding Mus_musculus 0 1838
ENSMUST00000160836 Aebp2-004 protein_coding Mus_musculus 0 1635
ENSMUST00000095350 Aebp2-003 protein_coding Mus_musculus 0 1341
ENSMUST00000162100 Aebp2-009 protein_coding Mus_musculus 0 1297
ENSMUST00000068583 Aebp2-201 protein_coding Mus_musculus 0 1230
ENSMUST00000032359 Aebp2-001 protein_coding Mus_musculus 0 1175
ENSMUST00000159979 Aebp2-008 protein_coding Mus_musculus 0 830
ENSMUST00000162903 Aebp2-012 protein_coding Mus_musculus 0 808
ENSMUST00000120353 Gm14240-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000162669 Aebp2-014 protein_coding Mus_musculus 0 455
ENSMUST00000160772 Aebp2-010 processed_transcript Mus_musculus 0 248

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