C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and SAM domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088027 Anks1-003 ENSMUSG00000024219 10090 + 17:27909372-28062597 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088027 3.685±1.38 3.341±0.34 4.218±0.00 8.682±5.69 3.731±0.82 2.935±0.55 3.934±0.42 3.131±0.81 0.838±0.35 7.930±1.97 0.440±0.14 3.543±1.49 1.963±0.42 0.939±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EV CIL_0002EV_0002 CGP 17:27901122-28062600
CIL_0002EU CIL_0002EU_0002 CGP 17:27909340-28080639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006929 IDA substrate-dependent cell migration
GO:0016322 IMP neuron remodeling
GO:0043005 IDA neuron projection
GO:0046875 IPI ephrin receptor binding
GO:0048013 IMP ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143125 anks1aa-002 protein_coding Danio_rerio 0 206
ENST00000360359 ANKS1A-001 protein_coding Homo_sapiens 0 3528
ENST00000470698 ANKS1A-002 processed_transcript Homo_sapiens 0 623

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