C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and sterile alpha motif domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360359 ANKS1A-001 ENSG00000064999 9606 + 6:34889265-35091413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360359
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360359 4.335±0.00 1.672±0.00 1.465±0.08 1.171±0.00 1.479±0.69 3.114±0.00 2.250±1.57 2.461±1.17 2.556±0.00 1.242±0.99 4.876±2.07 3.534±1.01 8.277±4.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EV CIL_0002EV_0001 CGP 6:34877778-35091413
CIL_0002EU CIL_0002EU_0001 CGP 6:34889265-35148610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006929 ISS substrate-dependent cell migration
GO:0016322 ISS neuron remodeling
GO:0043005 ISS neuron projection
GO:0048013 ISS ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088027 Anks1-003 protein_coding Mus_musculus 0 3528
ENSMUST00000114842 Anks1-001 protein_coding Mus_musculus 0 3138
ENSMUST00000025058 Anks1-002 protein_coding Mus_musculus 0 2920
ENSMUST00000139173 Anks1-004 processed_transcript Mus_musculus 0 2302
ENSDART00000143125 anks1aa-002 protein_coding Danio_rerio 3e-40 172

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