C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 9C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088092 Ttc9c-002 ENSMUSG00000071660 10090 - 19:8811296-8819294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088092 6.361±0.99 2.561±0.52 7.543±0.00 6.311±3.14 4.713±0.78 4.256±1.20 2.705±0.47 4.879±0.35 3.340±1.32 3.711±0.33 1.558±0.31 7.233±2.08 4.871±1.62 1.654±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IBA protein peptidyl-prolyl isomerization
GO:0003755 IBA peptidyl-prolyl cis-trans isomerase activity
GO:0005528 IBA FK506 binding
GO:0005789 IBA endoplasmic reticulum membrane
GO:0061077 IBA chaperone-mediated protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294161 TTC9C-003 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000316461 TTC9C-001 protein_coding Homo_sapiens 0 665
ENST00000530625 TTC9C-004 protein_coding Homo_sapiens 0 496
ENST00000532583 TTC9C-002 protein_coding Homo_sapiens 0 665

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