C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate 6-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088174 Hs6st1-001 ENSMUSG00000045216 10090 + 1:36068400-36106446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088174 11.781±4.84 75.339±12.17 7.357±1.39 27.505±14.35 13.784±2.33 36.472±2.21 8.355±1.33 51.799±4.78 32.801±10.18 12.876±2.56 8.938±1.58 29.032±10.84 13.969±6.78 1.348±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0015012 IMP heparan sulfate proteoglycan biosynthetic process
GO:0015015 IDA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0017095 IDA heparan sulfate 6-O-sulfotransferase activity
GO:0048286 IMP lung alveolus development
GO:0048666 ISS neuron development
GO:0060716 IMP labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000105778 hs6st1b-001 protein_coding Danio_rerio 0 656
ENSDART00000065929 hs6st3b-001 protein_coding Danio_rerio 0 385
ENSDART00000130855 CU929314.1-201 protein_coding Danio_rerio 0 320
ENSDART00000002250 hs6st2-001 protein_coding Danio_rerio 0 283
ENST00000259241 HS6ST1-001 protein_coding Homo_sapiens 0 1696
ENST00000463963 HS6ST1-004 processed_transcript Homo_sapiens 0 224
ENST00000469019 HS6ST1-003 processed_transcript Homo_sapiens 0 497
ENST00000481504 HS6ST1P1-001 processed_pseudogene Homo_sapiens 0 1670
ENST00000494089 HS6ST1-002 processed_transcript Homo_sapiens 0 586

Loading