C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nanos homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088237 Nanos1-201 ENSMUSG00000072437 10090 + 19:60755987-60759913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088237
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088237 0.138±0.09 0.653±0.09 0.325±0.02 4.910±2.15 0.638±0.51 0.505±0.05 0.080±0.02 0.094±0.03 0.592±0.61 0.461±0.14 0.019±0.01 1.743±0.95 0.231±0.16 0.258±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062M CIL_00062M_0002 CGP 19:60524696-60759913
CIL_0003K9 CIL_0003K9_0002 CGP 19:60755987-60790693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005737 ISA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0010631 ISS epithelial cell migration
GO:0016477 ISS cell migration
GO:0017148 ISS negative regulation of translation
GO:0030371 ISS translation repressor activity
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340087 NANOS1-001 protein_coding Homo_sapiens 0 307
ENST00000425699 NANOS1-002 protein_coding Homo_sapiens 0 571

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