C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 6, regulatory subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088788 Ppp6r2-201 ENSMUSG00000036561 10090 + 15:89253035-89286261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088788 6.806±2.21 6.233±0.63 5.513±1.41 14.106±2.99 7.139±1.98 4.763±1.61 5.165±2.74 5.215±1.30 3.788±1.62 7.232±0.38 5.971±1.52 8.665±2.69 1.320±0.45 10.845±3.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V2 CIL_0000V2_0003 CGP 15:89182217-89286261
CIL_00024L CIL_00024L_0002 CGP 15:89253035-89315311

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0019903 ISA protein phosphatase binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043666 ISA regulation of phosphoprotein phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216061 PPP6R2-004 protein_coding Homo_sapiens 0 1964
ENST00000359139 PPP6R2-001 protein_coding Homo_sapiens 0 2715
ENST00000395741 PPP6R2-002 protein_coding Homo_sapiens 0 2724
ENST00000395744 PPP6R2-003 protein_coding Homo_sapiens 0 2739
ENST00000401672 PPP6R2-007 protein_coding Homo_sapiens 0 913
ENST00000427222 PPP6R2-005 protein_coding Homo_sapiens 0 1336
ENST00000450880 PPP6R2P1-001 unprocessed_pseudogene Homo_sapiens 0 459
ENST00000592985 RP11-411B10.5-001 processed_pseudogene Homo_sapiens 0 276
ENST00000612753 PPP6R2-201 protein_coding Homo_sapiens 0 1964

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