C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089112 Tcf15-001 ENSMUSG00000068079 10090 + 2:152143561-152149097 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089112 16.730±11.41 9.517±3.71 1.645±0.35 1.085±0.35 12.278±6.70 2.174±0.69 10.926±4.39 1.923±0.55 0.125±0.08 1.382±0.77 6.270±2.42 3.812±1.35 2.537±2.40 0.550±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726
CIL_0003TX CIL_0003TX_0002 CGP 2:152105516-152149097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0003016 IMP respiratory system process
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007517 IMP muscle organ development
GO:0009952 IMP anterior/posterior pattern specification
GO:0010468 IMP regulation of gene expression
GO:0016265 IMP death
GO:0036342 IMP post-anal tail morphogenesis
GO:0042755 IMP eating behavior
GO:0043583 IMP ear development
GO:0043588 IMP skin development
GO:0045198 IMP establishment of epithelial cell apical/basal polarity
GO:0046983 IEA protein dimerization activity
GO:0048339 IMP paraxial mesoderm development
GO:0048644 IMP muscle organ morphogenesis
GO:0048705 IMP skeletal system morphogenesis
GO:0050884 IMP neuromuscular process controlling posture
GO:0060231 IMP mesenchymal to epithelial transition
GO:1903053 IMP regulation of extracellular matrix organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246080 TCF15-001 protein_coding Homo_sapiens 0 839
ENST00000621005 TCF15-201 protein_coding Homo_sapiens 0 824

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