C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like modifier activating enzyme 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089217 Uba1-001 ENSMUSG00000001924 10090 + X:20658326-20683179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000089217
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000089217 12.929±0.21 21.035±2.50 17.879±0.00 10.132±0.66 10.786±1.59 7.138±1.27 8.792±1.02 6.482±0.56 8.745±1.68 20.189±6.36 6.276±0.00 4.653±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G9 CIL_0005G9_0002 CGP X:20617503-20683179
CIL_0005G8 CIL_0005G8_0002 CGP X:20658326-20699880

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004839 IBA ubiquitin activating enzyme activity
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005829 IBA cytosol
GO:0016567 IBA protein ubiquitination
GO:0019941 IBA modification-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335972 UBA1-001 protein_coding Homo_sapiens 0 4041
ENST00000377269 UBA1-003 protein_coding Homo_sapiens 0 1709
ENST00000377351 UBA1-002 protein_coding Homo_sapiens 0 4132
ENST00000412206 UBA1-004 protein_coding Homo_sapiens 0 1062
ENST00000427561 UBA1-005 protein_coding Homo_sapiens 0 643
ENST00000442035 UBA1-007 protein_coding Homo_sapiens 0 1062
ENST00000451702 UBA1-008 protein_coding Homo_sapiens 0 732
ENST00000457753 UBA1-006 protein_coding Homo_sapiens 0 590
ENST00000490869 UBA1-009 processed_transcript Homo_sapiens 0 532

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