C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 2, mu 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090023 Ap2m1-002 ENSMUSG00000022841 10090 + 16:20535478-20544056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090023 88.097±18.05 90.508±14.63 70.230±2.50 113.825±49.16 87.254±30.72 81.208±15.53 68.429±2.67 129.171±22.04 100.076±13.11 97.522±9.73 26.093±4.86 89.884±18.02 105.259±22.90 22.950±10.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YF CIL_0003YF_0003 CGP 16:20516982-20544909
CIL_0005G2 CIL_0005G2_0002 CGP 16:20535478-20561379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006886 TAS intracellular protein transport
GO:0016192 TAS vesicle-mediated transport
GO:0030131 IEA clathrin adaptor complex
GO:0030141 TAS secretory granule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000151112 ap2m1b-002 protein_coding Danio_rerio 0 1319
ENSDART00000108636 ap2m1b-201 protein_coding Danio_rerio 0 1306
ENSDART00000124051 ap2m1b-202 protein_coding Danio_rerio 0 1291
ENSDART00000151418 ap2m1b-001 protein_coding Danio_rerio 0 1291
ENST00000292807 AP2M1-003 protein_coding Homo_sapiens 0 2311
ENST00000382456 AP2M1-001 protein_coding Homo_sapiens 0 2351
ENST00000411763 AP2M1-002 protein_coding Homo_sapiens 0 1772
ENST00000427072 AP2M1-009 protein_coding Homo_sapiens 0 387
ENST00000431779 AP2M1-017 protein_coding Homo_sapiens 0 632
ENST00000432591 AP2M1-015 protein_coding Homo_sapiens 0 684
ENST00000439647 AP2M1-005 protein_coding Homo_sapiens 0 2185
ENST00000442686 AP2M1-022 protein_coding Homo_sapiens 0 359
ENST00000448139 AP2M1-011 protein_coding Homo_sapiens 0 732
ENST00000455925 AP2M1-014 protein_coding Homo_sapiens 0 549
ENST00000460862 AP2M1-013 processed_transcript Homo_sapiens 0 586
ENST00000461733 AP2M1-007 processed_transcript Homo_sapiens 0 1552
ENST00000463935 AP2M1-020 retained_intron Homo_sapiens 0 357
ENST00000466598 AP2M1-012 retained_intron Homo_sapiens 0 616
ENST00000468048 AP2M1-006 retained_intron Homo_sapiens 0 411
ENST00000472560 AP2M1-016 retained_intron Homo_sapiens 0 815
ENST00000476434 AP2M1-019 retained_intron Homo_sapiens 0 385
ENST00000480260 AP2M1-021 retained_intron Homo_sapiens 0 311
ENST00000484469 AP2M1-008 retained_intron Homo_sapiens 0 276
ENST00000487958 AP2M1-010 retained_intron Homo_sapiens 0 765
ENST00000490151 AP2M1-018 retained_intron Homo_sapiens 0 625
ENST00000621863 AP2M1-201 protein_coding Homo_sapiens 0 1858

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