C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 2, mu 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000292807 AP2M1-003 ENSG00000161203 9606 + 3:184174855-184184091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000292807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000292807 170.877±0.00 155.445±0.00 5.131±0.00 166.324±103.58 72.297±64.63 85.094±79.81 56.947±46.44 168.531±0.00 33.195±19.49 133.265±0.00 37.410±25.28 96.583±54.24 189.084±28.26 137.732±42.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_0003YF CIL_0003YF_0002 CGP 3:184155388-184184091
CIL_0005G2 CIL_0005G2_0001 CGP 3:184174689-184194012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005515 IPI:IEA protein binding
GO:0005739 IEA mitochondrion
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005905 IEA coated pit
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007411 TAS axon guidance
GO:0008289 IEA lipid binding
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 IEA clathrin adaptor complex
GO:0030666 TAS endocytic vesicle membrane
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:1903077 IMP negative regulation of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007216 Ap2m1-001 protein_coding Mus_musculus 0 2344
ENSMUST00000090023 Ap2m1-002 protein_coding Mus_musculus 0 2311
ENSMUST00000119733 Gm13509-001 processed_pseudogene Mus_musculus 0 1873
ENSDART00000124051 ap2m1b-202 protein_coding Danio_rerio 0 1280
ENSDART00000151418 ap2m1b-001 protein_coding Danio_rerio 0 1280
ENSDART00000108636 ap2m1b-201 protein_coding Danio_rerio 0 1267
ENSDART00000151112 ap2m1b-002 protein_coding Danio_rerio 0 1253
ENSDART00000046587 ap2m1a-001 protein_coding Danio_rerio 0 1208
ENSDART00000012442 ap2m1a-201 protein_coding Danio_rerio 0 1203
ENSMUST00000126788 Ap2m1-010 processed_transcript Mus_musculus 0 872
ENSMUST00000131203 Ap2m1-008 retained_intron Mus_musculus 0 782
ENSDART00000138472 ap2m1a-004 protein_coding Danio_rerio 0 623
ENSMUST00000134981 Ap2m1-003 retained_intron Mus_musculus 0 604
ENSMUST00000148507 Ap2m1-004 retained_intron Mus_musculus 0 560
ENSMUST00000150537 Ap2m1-007 retained_intron Mus_musculus 0 468
ENSMUST00000135420 Ap2m1-005 retained_intron Mus_musculus 0 407
ENSMUST00000150986 Ap2m1-006 retained_intron Mus_musculus 0 220
ENSMUST00000133443 Ap2m1-009 retained_intron Mus_musculus 0 202
ENSDART00000132903 ap2m1a-003 retained_intron Danio_rerio 2e-28 132

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