C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxidation resistance 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090095 Oxr1-202 ENSMUSG00000022307 10090 + 15:41789515-41861045 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000090095
Transcript ID Adipose Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000090095 2.909±0.00 3.670±1.18 1.231±0.00 2.512±0.22 2.757±0.83 3.211±1.11 3.699±1.82 6.441±0.68 7.996±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060E CIL_00060E_0002 CGP 15:40655042-41861048
CIL_000609 CIL_000609_0002 CGP 15:41447482-41869720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005739 IDA mitochondrion
GO:0007628 IMP adult walking behavior
GO:0016491 IDA oxidoreductase activity
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0055114 IDA oxidation-reduction process
GO:0071447 IMP cellular response to hydroperoxide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297447 OXR1-003 protein_coding Homo_sapiens 0 1301
ENST00000312046 OXR1-001 protein_coding Homo_sapiens 0 2992
ENST00000435082 OXR1-005 nonsense_mediated_decay Homo_sapiens 0 1227
ENST00000438229 OXR1-007 nonsense_mediated_decay Homo_sapiens 0 935
ENST00000442977 OXR1-019 protein_coding Homo_sapiens 0 1286
ENST00000445937 OXR1-201 protein_coding Homo_sapiens 0 2987
ENST00000449762 OXR1-004 protein_coding Homo_sapiens 0 1696
ENST00000452423 OXR1-202 protein_coding Homo_sapiens 0 1705
ENST00000497705 OXR1-002 protein_coding Homo_sapiens 0 937
ENST00000517455 OXR1-015 processed_transcript Homo_sapiens 0 665
ENST00000517566 OXR1-006 protein_coding Homo_sapiens 0 1701
ENST00000517686 OXR1-013 protein_coding Homo_sapiens 0 368
ENST00000519415 OXR1-018 protein_coding Homo_sapiens 0 1062
ENST00000521592 OXR1-016 protein_coding Homo_sapiens 0 1002
ENST00000521864 OXR1-017 retained_intron Homo_sapiens 0 327
ENST00000531443 OXR1-012 protein_coding Homo_sapiens 0 2512
ENST00000559987 RP11-227D13.2-001 processed_pseudogene Homo_sapiens 0 662

Loading