C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00060E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169946-ENSG00000164830 CGP 9606 8:104590733-106752694
GeneTranscriptPositionBiotype
ENSG00000164830 (OXR1)
oxidation resistance 1 		ENST00000297447 (OXR1-003) 106726107-106752016 protein_coding
ENST00000312046 (OXR1-001) 106657854-106752694 protein_coding
ENST00000435082 (OXR1-005) 106657668-106751861 nonsense_mediated_decay
ENST00000438229 (OXR1-007) 106657891-106706982 nonsense_mediated_decay
ENST00000442977 (OXR1-019) 106447924-106751173 protein_coding
ENST00000445937 (OXR1-201) 106270178-106752689 protein_coding
ENST00000449762 (OXR1-004) 106726012-106752679 protein_coding
ENST00000452423 (OXR1-202) 106270178-106752689 protein_coding
ENST00000497705 (OXR1-002) 106618126-106707690 protein_coding
ENST00000517455 (OXR1-015) 106682493-106703087 processed_transcript
ENST00000517566 (OXR1-006) 106359476-106752682 protein_coding
ENST00000517686 (OXR1-013) 106580974-106684340 protein_coding
ENST00000519415 (OXR1-018) 106706381-106751861 protein_coding
ENST00000521592 (OXR1-016) 106726185-106751195 protein_coding
ENST00000521864 (OXR1-017) 106740243-106742484 retained_intron
ENST00000521963 (OXR1-014) 106581004-106605204 processed_transcript
ENST00000531443 (OXR1-012) 106359476-106751861 protein_coding
ENSG00000169946 (ZFPM2)
zinc finger protein, FOG family member 2 		ENST00000407775 (ZFPM2-002) 105318692-105804532 protein_coding
ENST00000511341 (ZFPM2-003) 105387146-105789027 processed_transcript
ENST00000517361 (ZFPM2-004) 105528884-105803597 protein_coding
ENST00000518180 (ZFPM2-009) 104703719-105419260 processed_transcript
ENST00000520027 (ZFPM2-005) 105358478-105634299 protein_coding
ENST00000520492 (ZFPM2-001) 105319543-105803870 protein_coding
ENST00000521923 (ZFPM2-010) 104590733-104895717 processed_transcript
ENST00000522160 (ZFPM2-007) 105419144-105451764 processed_transcript
ENST00000522296 (ZFPM2-008) 105690890-105803600 processed_transcript
ENST00000524235 (ZFPM2-006) 105358517-105561422 processed_transcript
ENSG00000213708 (SLC16A14P1)
solute carrier family 16, member 14 pseudogene 1 		ENST00000506846 (SLC16A14P1-001) 106215763-106217218 unprocessed_pseudogene
ENSG00000240271 (RP11-200A13.2)
 ENST00000465776 (RP11-200A13.2-001) 105011107-105011568 processed_pseudogene
ENSG00000243171 (RP11-273P3.1)
 ENST00000485656 (RP11-273P3.1-001) 105287830-105288365 processed_pseudogene
ENSG00000243601 (RPL12P24)
ribosomal protein L12 pseudogene 24 		ENST00000474907 (RPL12P24-001) 105737280-105737765 processed_pseudogene
ENSG00000243939 (RP11-200A13.1)
 ENST00000483263 (RP11-200A13.1-001) 104981164-104981579 processed_pseudogene
ENSG00000251003 (ZFPM2-AS1)
ZFPM2 antisense RNA 1 		ENST00000509144 (ZFPM2-AS1-005) 105796940-106060443 antisense
ENST00000518932 (ZFPM2-AS1-004) 105785055-105911869 antisense
ENST00000520078 (ZFPM2-AS1-003) 105798091-106060461 retained_intron
ENST00000520433 (ZFPM2-AS1-007) 105780246-106060524 antisense
ENST00000520594 (ZFPM2-AS1-006) 105785004-106060467 antisense
ENST00000521622 (ZFPM2-AS1-002) 105798327-106060491 antisense
ENST00000524045 (ZFPM2-AS1-001) 105784805-106060477 antisense
ENSG00000251892 (RNU7-84P)
RNA, U7 small nuclear 84 pseudogene 		ENST00000516083 (RNU7-84P-201) 106729795-106729856 snRNA
ENSG00000253318 (TMCC1P1)
transmembrane and coiled-coil domain family 1 pseudogene 1 		ENST00000518897 (TMCC1P1-001) 105194990-105196969 processed_pseudogene
ENSG00000253420 (RP11-642D21.2)
 ENST00000520588 (RP11-642D21.2-001) 105662352-105685765 antisense
ENSG00000253526 (RP11-152P17.3)
 ENST00000520870 (RP11-152P17.3-001) 105826570-105834038 lincRNA
ENSG00000253582 (RP11-649G15.2)
 ENST00000518591 (RP11-649G15.2-001) 106520474-106657548 antisense
ENSG00000253676 (TAGLN2P1)
transgelin 2 pseudogene 1 		ENST00000524097 (TAGLN2P1-001) 106697427-106698013 processed_pseudogene
ENSG00000254021 (RP11-778D12.2)
 ENST00000517318 (RP11-778D12.2-001) 106265435-106268741 lincRNA
ENSG00000254041 (RP11-574O7.1)
 ENST00000518927 (RP11-574O7.1-001) 105142860-105188606 antisense
ENSG00000254141 (RP11-642D21.1)
 ENST00000519805 (RP11-642D21.1-001) 105669991-105679031 sense_intronic
ENSG00000254615 (RP11-395G23.3)
 ENST00000521369 (RP11-395G23.3-001) 106270144-106272899 lincRNA
ENST00000577661 (RP11-395G23.3-002) 106270236-106272206 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_00060E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022306-ENSMUSG00000022307 CGP 10090 15:40655042-41861048
GeneTranscriptPositionBiotype
ENSMUSG00000022306 (Zfpm2)
zinc finger protein, multitype 2 		ENSMUST00000053467 (Zfpm2-201) 40655042-41104592 protein_coding
ENSMUSG00000022307 (Oxr1)
oxidation resistance 1 		ENSMUST00000022918 (Oxr1-201) 41789523-41861048 protein_coding
ENSMUST00000090095 (Oxr1-202) 41789515-41861045 protein_coding
ENSMUST00000090096 (Oxr1-203) 41447482-41861045 protein_coding
ENSMUST00000110297 (Oxr1-204) 41447482-41861045 protein_coding
ENSMUST00000166917 (Oxr1-205) 41830958-41861045 protein_coding
ENSMUST00000170127 (Oxr1-206) 41789034-41861045 protein_coding
ENSMUST00000179393 (Oxr1-207) 41449027-41861045 protein_coding
ENSMUSG00000048559 (4930555K19Rik)
RIKEN cDNA 4930555K19 gene 		ENSMUST00000060066 (4930555K19Rik-201) 41173701-41173871 processed_pseudogene
ENSMUSG00000097232 (Gm26854)
predicted gene, 26854 		ENSMUST00000180418 (Gm26854-201) 41758060-41788911 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164830 ENST00000297447 N/A N/A N/A N/A N/A N/A 3.366±0.55 N/A N/A N/A 2.763±0.00 N/A N/A N/A
ENST00000312046 4.768±0.00 1.767±0.00 N/A N/A 6.781±0.71 4.826±1.76 3.279±0.00 2.120±0.51 2.799±0.00 6.633±0.80 3.599±1.78 2.772±0.52 1.233±0.33 11.011±0.00
ENST00000435082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A
ENST00000438229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.580±0.00 N/A N/A
ENST00000442977 N/A N/A N/A 10.679±0.00 N/A N/A 1.447±0.00 N/A 2.558±0.00 N/A N/A N/A N/A N/A
ENST00000445937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.619±0.00 N/A
ENST00000449762 N/A N/A N/A N/A 4.348±0.00 N/A N/A 1.858±0.00 N/A N/A N/A 5.087±0.00 N/A N/A
ENST00000452423 N/A N/A N/A 5.519±0.00 N/A N/A N/A N/A N/A N/A N/A 2.405±0.00 N/A N/A
ENST00000497705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517455 N/A N/A 32.584±0.00 N/A N/A 19.609±0.00 N/A N/A 19.597±0.00 N/A N/A N/A N/A N/A
ENST00000517566 N/A N/A N/A 11.522±5.35 N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00 N/A
ENST00000517686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519415 N/A N/A N/A N/A N/A N/A N/A N/A 2.592±0.00 N/A N/A 7.694±0.00 4.684±0.00 18.417±0.00
ENST00000521592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.576±0.00 N/A N/A N/A
ENST00000521864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531443 N/A N/A N/A 5.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169946 ENST00000407775 1.584±0.00 1.211±0.00 N/A 2.792±0.84 0.893±0.58 0.849±0.00 2.198±1.75 0.271±0.00 0.527±0.19 2.380±0.00 4.351±0.00 4.855±5.00 1.025±0.14 2.133±1.22
ENST00000511341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517361 0.531±0.00 N/A N/A 1.376±0.13 0.617±0.00 0.906±0.17 1.942±0.00 N/A 2.170±0.00 0.544±0.00 3.264±1.56 1.008±0.00 N/A 0.503±0.00
ENST00000518180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520027 N/A N/A N/A N/A N/A N/A 1.812±0.00 N/A N/A N/A N/A 3.595±0.00 N/A 2.545±0.00
ENST00000520492 0.692±0.00 N/A 0.616±0.00 N/A N/A N/A N/A N/A 2.735±0.00 1.855±0.00 N/A 3.390±0.00 N/A N/A
ENST00000521923 N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522296 N/A N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A N/A
ENST00000524235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213708 ENST00000506846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00
ENSG00000240271 ENST00000465776 N/A N/A N/A 0.044±0.00 N/A 0.117±0.00 N/A N/A 0.070±0.00 0.039±0.00 0.476±0.37 0.063±0.00 N/A 0.036±0.00
ENSG00000243171 ENST00000485656 N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243601 ENST00000474907 N/A N/A N/A N/A 0.084±0.00 0.613±0.00 0.151±0.02 N/A 0.467±0.00 0.730±0.00 N/A N/A N/A N/A
ENSG00000243939 ENST00000483263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A 0.032±0.00
ENSG00000251003 ENST00000509144 N/A N/A N/A 0.928±0.00 0.253±0.00 0.147±0.00 0.029±0.00 0.193±0.00 N/A 0.744±0.67 N/A 0.303±0.00 0.219±0.10 0.166±0.07
ENST00000518932 N/A 0.094±0.00 N/A 0.058±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A 0.433±0.32 0.151±0.00 0.158±0.07
ENST00000520078 N/A 0.233±0.00 N/A 0.202±0.00 N/A 0.149±0.00 0.063±0.00 N/A 0.070±0.00 N/A 0.023±0.00 0.364±0.10 N/A 0.075±0.00
ENST00000520433 N/A N/A N/A N/A 0.148±0.00 0.129±0.00 N/A N/A 0.320±0.00 N/A N/A 0.303±0.12 0.066±0.00 0.086±0.00
ENST00000520594 0.172±0.00 N/A N/A N/A 0.293±0.16 N/A N/A 0.821±0.00 N/A N/A N/A 0.080±0.00 0.157±0.05 0.099±0.00
ENST00000521622 N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A
ENST00000524045 0.190±0.00 N/A 0.132±0.00 N/A 0.107±0.00 N/A 0.022±0.00 0.333±0.00 0.057±0.00 N/A N/A 0.149±0.00 0.098±0.00 0.046±0.00
ENSG00000251892 ENST00000516083 N/A N/A N/A N/A 0.585±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253318 ENST00000518897 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253420 ENST00000520588 0.073±0.00 N/A N/A 0.047±0.00 0.235±0.00 N/A 0.035±0.00 0.277±0.00 N/A 0.543±0.00 0.178±0.16 0.139±0.00 0.040±0.00 N/A
ENSG00000253526 ENST00000520870 N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A 0.434±0.00 0.111±0.00 N/A 0.064±0.01
ENSG00000253582 ENST00000518591 0.022±0.00 0.137±0.00 N/A 0.156±0.00 0.065±0.00 0.082±0.00 0.124±0.00 0.199±0.00 0.243±0.00 0.382±0.00 N/A 0.138±0.08 0.080±0.00 0.150±0.01
ENSG00000253676 ENST00000524097 0.063±0.00 0.140±0.00 2.237±0.00 0.228±0.00 0.530±0.46 1.997±0.00 0.452±0.00 0.109±0.00 0.749±0.00 0.627±0.52 N/A 0.302±0.23 0.115±0.00 0.032±0.00
ENSG00000254021 ENST00000517318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00
ENSG00000254041 ENST00000518927 0.049±0.00 0.110±0.00 N/A 0.155±0.00 0.100±0.05 0.089±0.00 N/A N/A 0.104±0.00 N/A N/A 0.031±0.00 0.040±0.00 0.282±0.14
ENSG00000254141 ENST00000519805 0.031±0.00 0.092±0.00 N/A 0.351±0.34 N/A N/A 0.142±0.00 N/A N/A N/A 0.188±0.00 0.041±0.00 0.046±0.00 0.197±0.01
ENSG00000254615 ENST00000521369 N/A N/A N/A N/A N/A N/A N/A 8.782±0.00 N/A N/A N/A N/A 1.560±0.00 N/A
ENST00000577661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022306 ENSMUST00000053467 1.622±0.90 0.810±0.25 1.841±0.14 4.492±2.02 0.590±0.25 0.474±0.08 2.587±0.14 0.349±0.09 0.205±0.11 0.790±0.19 0.053±0.02 3.381±0.90 0.225±0.18 1.513±0.36
ENSMUSG00000022307 ENSMUST00000022918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.940±0.00 1.883±0.61 7.487±4.09
ENSMUST00000090095 2.909±0.00 N/A N/A N/A 3.670±1.18 N/A 1.231±0.00 2.512±0.22 2.757±0.83 3.211±1.11 N/A 3.699±1.82 6.441±0.68 7.996±2.67
ENSMUST00000090096 N/A 8.021±2.78 N/A N/A N/A 1.068±0.39 1.156±0.21 1.297±0.32 N/A N/A N/A 1.848±0.72 N/A N/A
ENSMUST00000110297 N/A N/A N/A 51.510±0.00 N/A N/A N/A N/A N/A N/A N/A 1.842±0.52 N/A N/A
ENSMUST00000166917 7.280±1.14 22.782±0.00 12.865±0.01 12.257±1.34 4.853±1.27 2.900±0.49 8.888±1.00 3.052±0.11 6.050±1.69 12.172±3.28 8.336±0.84 7.900±3.94 6.172±2.73 N/A
ENSMUST00000170127 5.514±2.13 25.833±15.22 6.232±0.41 N/A 6.932±1.27 2.407±0.00 3.680±0.83 3.189±1.31 5.355±1.97 7.884±2.37 5.068±0.31 4.910±2.61 5.860±3.58 9.827±2.69
ENSMUST00000179393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048559 ENSMUST00000060066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 77.728±0.00
ENSMUSG00000097232 ENSMUST00000180418 N/A 0.557±0.00 0.026±0.00 0.251±0.00 N/A N/A N/A 0.061±0.00 0.013±0.00 N/A N/A 0.096±0.05 0.052±0.00 0.495±0.49

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